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HES6
COLON - Expression summary
RNA expressioni
HPA:12.2TPM
GTEx:9.1RPKM
FANTOM5:10.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 12.2
overview Male, age 54 Sample 1
TPM: 30.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 9.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 6.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 9.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 7.4
Samples: 149

Max RPKM: 17.6
Min RPKM: 2.9
Std RPKM: 3.0
Median RPKM: 6.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 17.6
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 17.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 17.0
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 15.8
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 15.8
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 15.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 14.6
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 14.5
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 14.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 13.7
Show all
Colon - Transverse
RPKM: 10.3
Samples: 196

Max RPKM: 31.4
Min RPKM: 2.0
Std RPKM: 5.1
Median RPKM: 9.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 31.4
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 29.2
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 27.9
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 26.9
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 26.8
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 24.9
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 22.0
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 20.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 19.9
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 19.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 10.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 11.4
FF:10014-101C5 62,83,84 years, mixed 10.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.