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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 997.8
Min RPKM: 419.3
Std RPKM: 129.3
Median RPKM: 677.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
997.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
982.2
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
950.7
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
946.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
922.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
913.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
893.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
877.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
868.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
849.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
848.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
844.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
835.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
834.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
819.0
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
818.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
818.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
814.5
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
810.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
810.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
810.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
806.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
805.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
800.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
800.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
795.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
794.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
794.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
792.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
783.8
GTEX-QCQG-0226-SM-48U28
50-59 years, female
776.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
776.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
770.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
750.1
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
749.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
748.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
746.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
745.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
738.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
736.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
731.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
729.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
723.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
718.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
716.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
711.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
706.0
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
703.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
703.2
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
697.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
695.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
682.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
672.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
668.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
665.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
662.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
662.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
653.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
653.3
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
651.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
647.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
644.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
636.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
636.6
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
634.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
632.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
627.7
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
619.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
618.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
618.6
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
617.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
608.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
607.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
606.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
605.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
604.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
603.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
593.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
576.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
576.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
572.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
568.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
563.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
557.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
553.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
551.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
551.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
545.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
544.0
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
541.3
GTEX-X585-1826-SM-4QAS3
50-59 years, male
537.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
536.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
536.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
526.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
515.6
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
515.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
507.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
504.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
500.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
499.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
496.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
460.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
431.2
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
419.3
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.