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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 947.5
Min RPKM: 179.6
Std RPKM: 165.1
Median RPKM: 445.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
947.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
928.8
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
897.2
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
822.6
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
778.7
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
723.7
GTEX-13O61-1326-SM-5KM31
60-69 years, male
708.0
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
705.5
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
699.2
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
684.6
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
682.3
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
671.3
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
666.4
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
665.7
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
655.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
649.2
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
646.6
GTEX-1192X-2526-SM-59868
50-59 years, male
621.4
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
600.7
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
600.6
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
599.8
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
597.6
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
595.6
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
586.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
576.6
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
571.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
557.4
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
554.8
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
548.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
520.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
513.7
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
507.3
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
503.5
GTEX-117YX-0326-SM-5GICL
50-59 years, male
490.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
489.4
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
488.1
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
466.7
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
458.3
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
452.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
452.5
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
452.5
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
449.9
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
449.2
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
446.3
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
444.9
GTEX-13113-1226-SM-5EGHT
60-69 years, female
444.8
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
433.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
431.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
427.2
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
427.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
426.2
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
424.2
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
416.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
415.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
411.1
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
408.0
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
406.5
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
405.8
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
397.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
394.3
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
392.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
391.9
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
382.1
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
369.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
358.0
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
353.9
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
353.4
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
348.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
348.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
339.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
334.8
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
316.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
315.8
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
308.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
307.3
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
301.1
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
282.5
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
280.2
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
278.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
270.5
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
269.0
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
267.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
263.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
259.0
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
253.0
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
251.9
GTEX-1122O-1326-SM-5H11F
60-69 years, female
236.4
GTEX-111YS-1426-SM-5GID8
60-69 years, male
179.6
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.