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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1885.9
Min RPKM: 724.6
Std RPKM: 249.2
Median RPKM: 1112.5
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1885.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1820.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1762.4
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1757.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1686.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1633.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1619.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1594.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1583.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1555.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1487.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1473.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1459.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1437.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1436.5
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1423.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1409.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1407.7
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1407.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1391.7
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1377.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1367.7
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1331.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1330.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1322.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1311.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1310.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1296.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1279.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1279.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1269.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1263.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1242.7
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1241.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1229.6
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1198.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1191.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
1180.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1179.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1163.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1154.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1139.4
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1134.2
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1131.8
GTEX-11I78-1926-SM-59878
50-59 years, female
1126.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1125.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1124.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1115.4
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1112.5
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1108.8
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1099.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1094.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1091.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1089.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1089.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1089.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1088.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1085.1
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1084.3
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1080.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1077.9
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1073.6
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1070.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1068.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1062.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1054.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1048.7
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1044.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1042.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1026.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1023.4
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1018.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
997.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
997.5
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
996.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
985.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
978.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
975.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
971.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
959.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
954.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
950.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
938.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
912.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
910.7
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
907.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
885.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
875.6
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
863.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
858.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
836.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
833.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
813.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
812.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
798.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
755.0
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
724.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.