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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2041.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1868.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3276.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2147.6
Min RPKM: 295.2
Std RPKM: 243.2
Median RPKM: 598.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
2147.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1399.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1343.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1340.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1267.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1239.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1232.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1222.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1177.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1156.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1126.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1088.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1073.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1064.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1040.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1039.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
990.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
967.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
939.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
938.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
929.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
926.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
921.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
919.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
913.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
906.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
900.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
896.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
886.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
864.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
849.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
843.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
842.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
841.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
833.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
827.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
825.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
818.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
815.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
811.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
808.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
808.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
799.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
792.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
785.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
783.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
774.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
770.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
769.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
764.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
755.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
750.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
749.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
748.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
745.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
740.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
739.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
739.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
730.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
728.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
723.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
720.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
718.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
716.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
715.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
715.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
714.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
704.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
704.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
702.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
694.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
693.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
690.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
687.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
687.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
685.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
682.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
673.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
673.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
667.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
663.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
662.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
661.4
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
659.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
657.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
654.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
651.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
650.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
649.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
647.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
646.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
642.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
639.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
636.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
635.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
630.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
626.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
625.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
621.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
612.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
611.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
609.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
608.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
608.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
606.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
603.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
601.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
595.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
595.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
593.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
592.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
587.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
587.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
585.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
584.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
584.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
584.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
580.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
579.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
578.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
574.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
570.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
568.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
565.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
562.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
559.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
558.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
556.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
555.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
548.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
544.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
541.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
539.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
536.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
533.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
532.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
528.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
528.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
525.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
525.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
518.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
517.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
516.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
515.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
514.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
514.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
511.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
507.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
505.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
500.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
499.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
497.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
496.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
494.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
493.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
492.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
483.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
481.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
481.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
476.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
474.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
472.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
470.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
470.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
468.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
458.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
457.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
455.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
454.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
453.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
451.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
447.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
443.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
439.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
439.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
436.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
433.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
427.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
426.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
426.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
424.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
424.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
422.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
421.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
417.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
416.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
407.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
396.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
393.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
393.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
391.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
388.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
386.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
385.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
383.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
382.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
380.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
374.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
373.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
373.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
366.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
361.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
361.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
358.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
356.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
349.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
346.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
343.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
333.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
328.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
315.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
304.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
299.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
295.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.