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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1105.0
Min RPKM: 109.1
Std RPKM: 224.6
Median RPKM: 492.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1105.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1095.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
978.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
964.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
934.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
910.7
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
883.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
880.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
877.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
873.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
866.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
824.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
779.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
748.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
717.0
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
716.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
715.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
715.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
713.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
705.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
700.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
687.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
686.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
681.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
678.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
677.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
659.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
652.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
648.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
638.8
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
628.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
607.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
606.0
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
592.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
591.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
590.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
585.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
575.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
565.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
546.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
544.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
541.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
529.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
527.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
513.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
501.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
496.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
489.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
480.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
475.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
473.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
471.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
461.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
459.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
452.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
447.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
440.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
433.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
431.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
425.9
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
422.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
418.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
414.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
405.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
402.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
390.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
377.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
376.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
375.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
373.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
360.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
354.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
344.6
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
344.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
327.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
323.7
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
320.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
318.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
299.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
291.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
287.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
280.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
275.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
253.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
241.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
234.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
225.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
211.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
196.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
172.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
158.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
154.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
127.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
109.1
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.