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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1532.1
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 678.7
Min RPKM: 211.4
Std RPKM: 91.2
Median RPKM: 433.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
678.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
611.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
601.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
600.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
589.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
575.5
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
564.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
561.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
556.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
556.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
546.2
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
545.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
544.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
542.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
539.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
536.4
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
532.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
530.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
529.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
526.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
524.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
515.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
515.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
513.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
509.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
508.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
502.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
499.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
496.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
492.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
491.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
487.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
487.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
484.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
479.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
472.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
470.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
466.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
464.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
463.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
462.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
461.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
460.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
460.3
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
459.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
457.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
457.1
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
457.1
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
451.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
449.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
448.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
446.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
445.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
443.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
442.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
441.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
433.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
433.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
432.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
431.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
428.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
427.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
427.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
426.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
421.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
421.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
417.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
413.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
413.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
412.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
409.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
409.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
407.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
407.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
406.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
406.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
405.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
404.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
392.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
392.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
391.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
389.4
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
384.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
377.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
370.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
366.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
364.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
363.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
360.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
358.3
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
353.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
349.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
347.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
341.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
335.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
334.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
323.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
323.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
316.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
308.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
304.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
299.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
299.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
297.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
291.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
291.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
290.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
286.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
283.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
270.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
266.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
253.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
237.5
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
211.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 631.6
Samples: 108
Max RPKM: 1004.4
Min RPKM: 200.5
Std RPKM: 162.8
Median RPKM: 664.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
1004.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
975.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
916.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
902.9
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
877.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
872.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
835.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
816.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
813.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
811.5
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
808.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
806.6
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
805.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
795.1
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
791.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
790.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
776.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
774.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
770.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
768.4
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
768.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
767.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
749.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
746.4
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
741.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
741.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
738.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
737.0
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
734.8
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
727.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
725.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
723.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
720.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
718.5
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
710.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
702.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
700.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
699.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
698.6
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
697.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
695.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
694.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
690.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
688.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
688.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
682.9
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
681.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
675.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
672.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
672.1
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
669.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
668.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
667.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
664.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
664.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
661.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
661.7
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
655.7
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
650.6
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
649.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
647.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
646.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
637.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
636.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
632.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
631.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
630.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
629.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
622.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
622.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
608.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
603.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
599.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
592.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
572.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
571.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
560.8
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
553.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
544.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
539.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
537.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
531.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
525.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
516.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
515.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
514.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
510.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
508.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
502.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
486.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
474.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
426.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
415.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
404.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
398.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
390.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
387.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
378.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
378.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
355.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
341.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
331.0
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
310.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
302.0
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
276.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
254.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
240.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
200.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.