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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1291.6
Min RPKM: 100.5
Std RPKM: 190.5
Median RPKM: 469.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
1291.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
852.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
767.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
767.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
759.2
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
750.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
743.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
741.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
721.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
716.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
701.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
681.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
679.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
675.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
672.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
671.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
665.9
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
657.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
650.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
646.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
641.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
634.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
627.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
621.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
620.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
619.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
612.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
610.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
608.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
603.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
594.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
585.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
584.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
577.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
572.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
571.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
564.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
560.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
552.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
550.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
549.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
544.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
544.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
541.0
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
536.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
534.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
525.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
517.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
513.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
509.0
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
501.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
485.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
485.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
481.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
481.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
476.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
473.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
471.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
469.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
460.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
456.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
451.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
441.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
427.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
416.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
411.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
410.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
409.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
405.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
404.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
401.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
400.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
397.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
390.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
389.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
385.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
363.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
363.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
361.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
359.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
357.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
354.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
350.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
347.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
338.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
337.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
335.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
334.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
327.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
320.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
313.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
307.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
295.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
286.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
281.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
281.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
278.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
266.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
261.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
258.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
257.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
251.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
235.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
229.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
227.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
203.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
195.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
180.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
178.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
176.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
174.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
164.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
161.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
157.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
138.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
108.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
100.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.