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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 863.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 832.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 633.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 403.0
Min RPKM: 124.1
Std RPKM: 46.9
Median RPKM: 210.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
403.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
390.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
357.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
344.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
341.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
341.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
340.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
329.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
327.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
311.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
309.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
305.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
300.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
299.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
298.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
295.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
295.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
295.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
290.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
284.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
283.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
281.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
280.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
280.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
279.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
279.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
278.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
273.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
271.6
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
264.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
262.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
262.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
261.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
260.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
260.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
259.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
258.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
255.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
250.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
249.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
249.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
249.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
247.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
247.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
246.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
246.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
245.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
245.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
245.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
245.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
245.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
244.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
244.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
243.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
243.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
242.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
241.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
241.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
240.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
238.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
237.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
237.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
235.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
235.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
235.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
232.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
232.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
231.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
231.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
231.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
229.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
228.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
228.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
227.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
226.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
226.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
225.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
224.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
223.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
223.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
223.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
223.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
223.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
222.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
221.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
221.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
220.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
220.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
219.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
219.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
219.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
219.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
218.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
218.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
218.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
218.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
216.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
216.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
215.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
215.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
215.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
213.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
213.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
212.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
211.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
211.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
211.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
210.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
209.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
209.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
208.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
208.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
207.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
207.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
207.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
207.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
206.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
206.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
206.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
205.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
204.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
204.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
203.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
203.5
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
203.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
202.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
202.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
202.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
202.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
201.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
201.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
200.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
200.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
199.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
199.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
199.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
197.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
197.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
197.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
197.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
195.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
195.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
195.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
195.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
195.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
194.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
193.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
193.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
193.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
191.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
191.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
190.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
190.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
190.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
190.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
189.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
189.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
188.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
188.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
187.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
186.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
186.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
186.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
186.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
186.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
186.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
185.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
185.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
185.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
184.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
183.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
181.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
181.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
181.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
180.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
179.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
176.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
176.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
176.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
174.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
174.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
173.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
172.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
171.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
170.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
170.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
170.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
169.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
169.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
167.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
167.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
167.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
167.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
167.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
166.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
164.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
163.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
163.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
162.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
161.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
161.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
159.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
159.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
159.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
158.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
157.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
157.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
156.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
152.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
151.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
148.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
144.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
134.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
124.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.