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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 951.7
Min RPKM: 36.9
Std RPKM: 210.4
Median RPKM: 209.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
951.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
911.1
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
852.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
827.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
737.9
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
725.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
685.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
666.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
620.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
605.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
554.9
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
547.3
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
539.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
509.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
493.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
485.0
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
482.7
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
474.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
465.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
438.3
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
432.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
431.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
426.7
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
410.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
408.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
401.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
400.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
395.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
388.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
375.7
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
364.3
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
331.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
330.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
324.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
296.5
GTEX-QCQG-1226-SM-48U23
50-59 years, female
295.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
293.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
285.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
284.5
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
281.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
271.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
249.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
241.3
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
240.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
231.8
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
228.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
222.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
209.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
208.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
206.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
204.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
200.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
197.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
190.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
188.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
181.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
178.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
171.1
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
168.9
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
164.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
159.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
158.3
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
154.2
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
152.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
151.6
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
150.7
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
142.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
139.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
136.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
135.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
132.7
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
128.6
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
125.9
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
121.9
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
119.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
117.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
116.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
116.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
113.4
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
112.6
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
111.4
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
111.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
108.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
107.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
104.1
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
102.2
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
86.9
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
86.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
85.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
77.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
76.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
73.6
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
68.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
62.2
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
54.8
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
36.9
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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