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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 514.4
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 361.1
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 178.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 168.4
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 399.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 402
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 173.9
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 194.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 494.6
Min RPKM: 28.4
Std RPKM: 91.4
Median RPKM: 142.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
494.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
465.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
448.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
422.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
375.4
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
353.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
294.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
289.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
287.8
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
286.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
277.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
268.4
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
268.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
262.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
261.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
259.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
258.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
256.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
248.5
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
245.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
245.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
233.1
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
228.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
227.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
219.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
214.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
211.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
208.5
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
203.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
199.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
195.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
187.4
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
186.5
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
186.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
183.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
183.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
181.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
178.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
178.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
170.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
169.4
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
168.8
GTEX-QEL4-1226-SM-447A4
50-59 years, male
168.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
164.2
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
161.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
161.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
159.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
159.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
157.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
156.7
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
155.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
154.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
152.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
150.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
145.6
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
145.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
144.8
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
143.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
142.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
142.3
GTEX-P78B-1326-SM-3P611
40-49 years, female
139.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
138.7
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
138.1
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
133.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
133.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
128.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
128.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
126.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
125.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
124.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
122.8
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
119.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
118.6
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
116.2
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
114.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
111.3
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
110.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
109.7
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
109.1
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
108.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
107.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
106.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
105.9
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
102.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
102.6
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
102.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
101.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
101.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
100.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
97.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
95.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
94.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
93.7
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
91.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
89.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
86.1
GTEX-13112-1426-SM-5EGH8
50-59 years, male
81.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
76.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
75.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
74.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
73.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
70.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
67.6
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
64.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
61.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
60.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
59.0
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
55.4
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
55.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
52.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
51.6
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
46.7
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
46.6
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
45.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
45.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
40.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
40.5
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
32.8
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
28.4
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
