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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 200.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 216.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 116
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 195.0
Min RPKM: 69.1
Std RPKM: 19.2
Median RPKM: 110.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
195.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
185.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
179.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
168.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
167.0
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
162.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
160.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
159.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
154.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
151.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
151.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
148.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
148.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
146.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
145.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
143.6
GTEX-X261-0626-SM-3NMD9
50-59 years, male
142.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
139.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
138.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
137.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
137.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
137.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
137.0
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
136.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
135.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
135.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
134.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
134.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
134.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
131.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
131.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
129.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
128.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
128.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
128.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
125.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
125.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
125.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
124.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
124.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
124.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
124.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
124.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
124.2
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
124.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
123.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
123.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
123.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
123.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
123.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
122.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
122.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
122.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
122.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
122.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
121.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
121.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
121.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
121.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
120.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
120.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
120.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
119.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
118.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
118.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
118.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
117.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
117.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
117.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
117.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
117.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
116.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
116.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
116.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
116.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
116.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
115.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
115.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
115.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
115.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
114.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
114.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
114.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
114.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
113.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
112.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
112.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
112.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
112.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
112.5
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
112.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
112.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
112.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
112.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
111.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
111.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
111.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
110.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
110.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
110.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
110.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
110.8
GTEX-S341-1526-SM-4AD6K
40-49 years, female
110.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
110.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
110.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
110.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
110.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
110.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
110.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
109.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
109.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
109.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
109.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
109.5
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
109.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
109.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
108.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
108.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
108.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
107.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
107.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
107.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
107.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
107.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
107.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
106.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
106.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
106.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
106.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
106.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
106.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
106.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
105.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
105.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
105.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
105.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
105.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
105.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
105.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
105.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
104.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
104.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
104.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
104.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
104.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
104.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
104.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
104.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
104.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
103.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
103.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
103.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
103.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
103.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
103.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
103.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
102.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
102.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
101.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
101.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
101.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
101.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
101.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
101.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
100.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
100.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
100.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
100.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
100.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
99.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
99.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
99.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
99.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
99.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
99.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
99.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
99.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
98.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
98.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
98.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
98.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
98.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
97.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
97.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
96.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
96.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
96.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
95.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
94.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
93.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
93.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
93.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
91.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
90.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
90.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
89.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
89.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
88.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
87.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
87.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
87.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
87.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
86.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
85.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
84.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
84.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
84.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
83.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
83.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
83.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
81.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
80.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
75.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
69.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.