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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 591.6
Min RPKM: 12.4
Std RPKM: 94.8
Median RPKM: 106.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
591.6
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
420.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
348.5
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
323.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
321.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
286.9
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
272.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
255.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
245.6
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
236.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
234.6
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
233.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
232.5
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
221.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
209.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
208.4
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
203.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
196.8
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
195.0
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
175.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
170.4
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
167.4
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
164.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
162.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
151.5
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
148.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
141.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
140.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
139.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
137.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
136.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
135.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
133.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
132.3
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
131.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
130.7
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
129.4
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
128.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
125.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
124.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
123.3
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
116.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
115.9
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
114.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
112.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
111.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
108.2
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
106.8
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
105.9
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
104.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
100.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
96.8
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
92.6
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
92.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
92.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
91.2
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
88.2
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
87.8
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
85.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
83.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
83.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
78.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
73.5
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
67.0
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
66.5
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
65.3
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
62.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
61.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
60.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
57.5
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
55.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
54.7
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
53.8
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
52.7
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
50.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
50.1
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
49.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
49.8
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
47.0
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
45.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
44.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
41.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
39.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
39.2
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
34.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
32.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
31.2
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
30.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
28.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
27.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
25.7
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
25.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
17.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
17.2
GTEX-S341-1226-SM-4AD5S
40-49 years, female
16.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
12.4
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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