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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 374.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 209.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 194.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 284.5
Min RPKM: 40.2
Std RPKM: 46.0
Median RPKM: 99.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
284.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
259.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
254.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
237.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
234.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
219.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
209.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
209.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
206.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
200.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
197.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
194.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
193.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
191.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
190.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
190.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
190.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
188.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
187.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
187.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
183.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
182.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
180.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
179.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
177.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
177.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
173.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
173.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
171.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
171.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
169.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
168.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
167.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
166.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
165.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
158.6
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
144.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
141.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
141.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
140.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
138.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
138.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
138.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
138.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
137.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
136.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
135.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
135.2
GTEX-11P81-1926-SM-5BC53
30-39 years, female
134.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
134.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
133.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
133.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
132.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
132.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
132.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
132.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
132.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
129.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
129.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
128.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
127.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
127.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
126.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
124.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
123.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
123.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
123.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
123.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
122.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
120.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
120.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
120.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
118.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
118.7
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
118.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
117.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
116.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
115.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
114.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
113.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
113.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
113.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
113.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
113.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
113.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
112.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
112.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
111.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
110.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
110.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
110.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
109.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
108.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
108.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
107.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
106.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
105.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
104.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
104.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
104.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
104.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
103.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
102.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
101.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
101.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
100.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
100.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
99.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
99.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
98.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
98.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
96.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
96.2
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
95.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
94.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
93.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
92.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
92.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
90.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
90.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
90.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
89.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
89.8
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
89.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
89.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
89.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
88.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
88.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
87.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
87.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
87.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
86.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
86.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
86.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
86.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
86.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
85.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
85.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
85.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
85.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
85.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
85.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
84.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
84.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
83.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
83.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
83.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
82.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
82.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
81.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
81.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
81.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
81.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
81.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
80.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
78.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
78.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
78.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
78.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
77.4
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
77.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
76.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
75.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
75.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
75.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
74.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
74.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
74.1
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
73.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
72.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
72.3
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
72.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
71.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
71.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
70.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
70.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
70.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
70.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
69.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
69.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
69.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
67.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
66.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
66.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
65.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
65.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
65.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
65.0
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
64.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
64.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
64.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
64.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
63.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
62.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
62.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
61.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
60.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
60.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
59.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
59.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
58.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
57.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
56.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
56.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
54.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
53.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
52.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
51.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
47.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
45.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
45.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
44.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
44.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
40.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.