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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 229.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 114.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 99.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 63.3
Min RPKM: 9.7
Std RPKM: 10.5
Median RPKM: 23.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
63.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
52.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
51.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
50.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
50.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
50.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
47.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
47.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
46.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
46.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
45.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
44.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
43.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
43.6
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
43.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
43.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
42.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
42.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
40.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
40.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
40.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
39.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
39.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
39.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
38.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
38.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
38.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
37.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
37.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
37.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
37.0
GTEX-REY6-2426-SM-48FF5
60-69 years, male
37.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
36.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
36.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
36.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
36.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
36.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
35.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
35.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
35.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
35.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
34.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
34.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
34.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
34.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
33.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
33.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
33.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
32.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
32.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
32.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
32.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
32.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
32.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
32.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
31.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
31.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
31.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
31.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
31.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
31.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
31.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
30.9
GTEX-R55D-0826-SM-48FEA
50-59 years, male
30.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
30.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
30.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
29.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
29.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
29.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
29.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
28.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
28.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
28.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
28.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
28.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
28.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
28.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
28.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
27.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
27.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
27.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
27.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
27.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
27.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
26.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
26.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
26.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
26.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
26.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
26.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
26.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
26.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
26.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
25.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
25.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
25.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
25.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
24.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
24.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
24.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
24.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
24.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
24.4
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
24.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
24.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
24.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
23.9
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
23.8
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
23.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
23.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
23.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
23.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
22.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
22.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
22.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
22.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
22.4
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
22.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
22.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
22.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
22.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
22.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
21.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
21.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
21.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
21.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
21.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
21.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
21.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
21.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
20.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
20.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
20.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
20.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
20.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
20.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
19.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
19.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
19.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
19.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
19.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
19.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
18.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
18.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
18.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
18.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
18.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
17.9
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
17.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
17.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
17.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
17.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
17.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
17.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
16.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
16.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
16.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
16.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
16.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
16.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
16.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
16.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
16.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
16.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
15.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
15.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
15.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
15.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
15.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
15.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
15.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
15.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
15.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
14.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
14.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
14.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
14.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
14.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
14.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
14.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
14.3
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
13.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
13.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
13.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
13.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
13.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
13.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
13.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
13.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
13.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
13.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
13.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
12.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
12.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
12.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
12.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
12.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
12.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
12.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
11.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
11.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
11.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
11.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
11.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
11.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
11.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
11.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
11.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
11.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
10.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
10.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
9.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
9.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
9.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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