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COLON - Expression summary
RNA expressioni
HPA:68.0TPM
GTEx:205.9RPKM
FANTOM5:87.1Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 68.0
overview Male, age 54 Sample 1
TPM: 14.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 35.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 104.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 47.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 163.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 51.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 132.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 29.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 62.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 138.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 73.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 205.9
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 316.2
Samples: 149

Max RPKM: 1255.5
Min RPKM: 43.3
Std RPKM: 223.0
Median RPKM: 236.8
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 1255.5
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 996.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 927.4
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 858.3
GTEX-147JS-2626-SM-5S2UX 60-69 years, male 849.1
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 830.8
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 816.1
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 814.0
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 809.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 767.1
Show all
Colon - Transverse
RPKM: 122.1
Samples: 196

Max RPKM: 962.9
Min RPKM: 1.6
Std RPKM: 167.2
Median RPKM: 59.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 962.9
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 757.9
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 745.1
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 735.5
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 654.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 601.6
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 566.4
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 557.6
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 539.1
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 505.3
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 87.1
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 63.6
FF:10014-101C5 62,83,84 years, mixed 87.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.