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DCAF6
COLON - Expression summary
RNA expressioni
HPA:27.8TPM
GTEx:16.2RPKM
FANTOM5:90.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 27.8
overview Male, age 54 Sample 1
TPM: 27.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 22.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 14.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 37.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 31.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 35
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 34.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 16.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 19.0
Samples: 149

Max RPKM: 31.3
Min RPKM: 9.7
Std RPKM: 3.5
Median RPKM: 18.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 31.3
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 28.5
GTEX-ZYT6-2826-SM-5GICX 30-39 years, male 28.4
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 27.0
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 26.4
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 26.4
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 26.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 25.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 25.2
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 24.4
Show all
Colon - Transverse
RPKM: 14.0
Samples: 196

Max RPKM: 27.7
Min RPKM: 6.2
Std RPKM: 3.6
Median RPKM: 13.3
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 27.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 25.0
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 24.3
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 24.3
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 23.0
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 22.5
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 21.6
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 21.5
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 21.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 20.9
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 90.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 77.9
FF:10014-101C5 62,83,84 years, mixed 90.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.