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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 550.9
Min RPKM: 15.4
Std RPKM: 121.4
Median RPKM: 144.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
550.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
490.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
465.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
446.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
431.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
419.1
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
399.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
388.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
371.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
366.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
363.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
321.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
320.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
314.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
303.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
301.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
267.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
263.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
248.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
244.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
235.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
232.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
227.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
225.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
225.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
215.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
213.3
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
211.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
208.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
206.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
205.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
199.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
199.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
185.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
182.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
182.5
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
176.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
166.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
162.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
160.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
157.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
156.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
155.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
151.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
151.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
149.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
145.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
143.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
141.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
139.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
137.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
137.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
135.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
125.8
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
125.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
120.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
110.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
109.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
106.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
102.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
101.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
100.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
96.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
95.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
88.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
87.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
86.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
84.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
83.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
76.2
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
74.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
74.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
69.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
63.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
60.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
59.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
58.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
57.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
53.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
51.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
48.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
48.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
46.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
46.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
44.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
42.9
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
38.8
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
38.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
37.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
25.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
23.7
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
20.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
17.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
15.4
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.