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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 826.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 217.5
Min RPKM: 21.3
Std RPKM: 38.7
Median RPKM: 93.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
217.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
171.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
168.2
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
163.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
161.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
159.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
148.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
144.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
144.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
143.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
142.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
142.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
140.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
138.9
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
137.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
137.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
136.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
134.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
133.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
133.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
132.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
131.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
130.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
128.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
124.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
123.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
122.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
120.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
119.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
118.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
117.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
116.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
113.9
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
111.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
111.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
110.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
110.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
109.0
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
108.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
106.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
105.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
104.4
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
104.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
104.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
103.9
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
102.4
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
102.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
100.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
100.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
97.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
97.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
95.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
95.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
95.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
94.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
94.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
93.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
92.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
89.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
89.5
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
88.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
88.0
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
86.5
GTEX-1128S-2726-SM-5H12C
60-69 years, female
86.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
86.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
84.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
83.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
80.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
80.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
80.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
79.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
79.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
77.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
75.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
75.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
74.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
74.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
72.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
72.0
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
70.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
70.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
68.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
68.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
64.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
63.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
62.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
60.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
60.0
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
59.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
59.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
58.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
56.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
52.3
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
51.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
51.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
49.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
48.9
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
48.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
47.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
45.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
44.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
40.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
39.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
38.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
34.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
33.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
33.1
GTEX-11GSP-3226-SM-5986O
60-69 years, female
31.4
GTEX-144FL-3026-SM-5O99C
50-59 years, male
30.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
29.8
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
26.8
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
22.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
21.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
21.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 221.0
Samples: 108
Max RPKM: 420.4
Min RPKM: 19.2
Std RPKM: 101.0
Median RPKM: 240.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
420.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
409.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
397.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
395.4
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
383.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
373.4
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
371.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
370.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
353.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
349.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
344.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
341.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
334.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
331.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
329.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
323.5
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
317.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
316.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
312.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
311.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
307.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
306.1
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
305.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
301.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
299.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
298.7
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
298.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
296.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
294.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
294.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
288.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
284.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
281.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
275.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
271.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
270.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
270.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
269.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
269.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
268.2
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
267.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
262.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
261.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
260.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
259.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
254.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
253.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
251.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
247.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
247.1
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
246.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
244.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
242.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
240.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
240.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
239.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
239.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
235.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
231.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
225.9
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
222.9
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
221.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
220.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
215.2
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
209.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
208.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
204.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
199.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
195.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
193.6
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
193.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
186.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
181.5
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
175.4
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
173.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
172.4
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
171.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
166.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
157.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
155.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
152.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
139.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
138.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
116.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
108.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
108.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
105.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
103.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
95.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
92.0
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
90.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
88.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
87.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
87.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
87.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
85.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
82.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
77.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
66.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
55.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
54.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
46.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
44.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
42.0
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
34.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
20.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
19.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
19.2
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.