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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 969.2
Min RPKM: 289.4
Std RPKM: 119.0
Median RPKM: 484.2
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
969.2
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
803.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
777.8
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
758.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
712.0
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
706.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
703.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
693.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
652.4
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
642.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
627.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
624.4
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
623.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
623.5
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
622.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
622.6
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
607.5
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
604.8
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
603.2
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
603.1
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
602.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
596.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
591.8
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
590.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
589.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
566.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
559.5
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
547.0
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
545.8
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
544.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
541.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
535.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
532.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
530.2
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
528.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
524.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
523.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
523.0
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
520.4
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
513.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
510.1
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
507.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
503.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
496.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
490.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
490.6
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
489.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
487.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
480.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
473.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
465.2
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
459.4
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
457.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
457.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
456.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
455.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
447.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
441.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
441.4
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
438.9
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
438.7
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
437.5
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
436.9
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
436.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
435.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
430.7
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
425.0
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
425.0
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
421.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
417.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
417.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
413.7
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
413.1
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
412.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
411.1
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
410.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
409.3
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
406.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
402.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
402.2
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
399.4
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
395.3
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
395.0
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
387.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
384.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
379.6
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
375.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
364.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
352.0
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
346.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
343.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
340.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
338.6
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
327.7
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
321.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
289.4
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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