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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 574.7
Min RPKM: 186.9
Std RPKM: 71.7
Median RPKM: 307.8
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
574.7
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
546.8
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
433.4
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
424.8
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
417.5
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
394.6
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
376.3
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
368.6
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
365.0
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
340.5
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
336.4
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
336.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
335.9
GTEX-Y111-2626-SM-4TT24
50-59 years, male
333.3
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
331.2
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
330.9
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
327.6
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
325.7
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
324.6
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
321.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
321.8
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
321.5
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
320.7
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
319.7
GTEX-X261-2426-SM-4PQZU
50-59 years, male
317.9
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
317.1
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
315.4
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
307.8
GTEX-1445S-2926-SM-5O993
60-69 years, male
307.8
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
307.1
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
306.9
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
303.4
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
302.2
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
292.1
GTEX-13O21-1926-SM-5MR39
50-59 years, male
288.3
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
285.6
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
281.5
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
275.4
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
265.8
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
263.3
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
259.6
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
257.5
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
256.2
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
256.2
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
255.6
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
253.8
GTEX-11P82-0926-SM-5986X
20-29 years, male
252.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
251.3
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
247.2
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
245.4
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
233.1
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
226.5
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
224.6
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
220.0
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
213.3
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
203.7
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
186.9
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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