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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 415.5
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 246.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 299.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 367.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 403
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 486.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 402.1
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 524.2
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 275.3
Min RPKM: 49.4
Std RPKM: 40.8
Median RPKM: 116.9
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
275.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
273.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
250.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
237.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
233.0
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
230.6
GTEX-12696-0826-SM-5EGGE
60-69 years, male
206.9
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
206.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
182.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
181.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
181.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
177.2
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
175.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
164.9
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
162.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
158.4
GTEX-QESD-2026-SM-447BI
20-29 years, male
157.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
154.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
154.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
154.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
153.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
152.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
151.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
151.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
149.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
148.2
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
147.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
146.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
144.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
142.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
141.7
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
141.3
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
138.7
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
137.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
137.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
136.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
135.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
135.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
135.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
132.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
132.5
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
131.1
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
129.6
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
129.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
125.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
124.0
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
123.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
123.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
122.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
121.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
120.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
120.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
119.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
119.6
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
119.6
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
119.5
GTEX-1399T-0826-SM-5IFES
60-69 years, male
119.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
119.3
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
117.0
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
116.9
GTEX-Q734-0326-SM-48U15
40-49 years, female
116.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
116.7
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
114.9
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
114.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
114.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
114.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
114.2
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
114.2
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
114.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
113.4
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
113.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
112.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
111.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
111.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
111.6
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
110.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
110.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
110.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
109.2
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
109.1
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
108.8
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
108.7
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
107.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
106.6
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
106.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
105.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
105.1
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
104.5
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
104.1
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
103.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
100.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
99.6
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
97.1
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
93.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
93.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
92.8
GTEX-13113-1326-SM-5GCOI
60-69 years, female
92.4
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
92.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
91.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
89.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
88.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
88.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
87.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
86.5
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
86.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
85.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
85.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
84.4
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
79.7
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
79.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
79.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
76.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
75.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
74.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
72.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
70.1
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
69.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
69.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
49.4
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
