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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2169.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2061.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2365.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1467.6
Min RPKM: 226.3
Std RPKM: 167.1
Median RPKM: 444.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1467.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1137.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1120.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1048.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
995.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
861.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
835.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
809.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
782.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
771.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
768.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
761.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
755.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
740.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
730.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
718.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
704.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
701.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
698.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
692.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
685.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
674.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
673.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
655.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
647.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
640.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
634.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
630.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
618.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
611.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
609.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
609.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
603.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
601.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
600.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
599.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
584.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
584.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
581.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
579.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
577.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
573.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
571.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
571.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
571.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
565.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
564.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
563.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
561.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
560.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
560.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
549.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
548.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
545.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
544.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
540.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
533.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
533.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
530.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
530.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
527.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
526.4
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
523.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
519.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
518.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
515.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
510.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
507.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
505.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
502.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
501.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
499.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
494.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
493.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
493.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
493.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
492.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
491.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
491.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
490.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
489.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
486.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
482.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
481.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
479.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
478.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
478.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
478.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
474.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
473.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
472.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
469.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
467.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
465.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
465.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
464.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
463.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
459.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
458.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
457.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
456.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
449.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
448.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
448.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
447.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
445.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
445.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
443.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
443.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
443.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
442.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
442.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
442.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
439.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
439.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
436.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
435.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
434.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
434.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
431.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
429.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
429.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
429.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
427.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
426.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
424.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
424.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
424.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
423.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
422.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
422.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
420.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
420.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
415.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
413.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
413.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
412.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
408.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
404.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
403.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
402.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
400.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
398.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
396.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
393.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
392.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
390.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
385.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
384.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
383.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
382.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
379.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
379.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
379.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
376.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
376.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
375.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
373.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
371.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
369.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
366.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
364.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
364.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
361.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
359.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
358.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
356.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
356.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
356.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
356.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
354.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
353.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
351.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
348.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
348.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
347.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
344.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
344.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
343.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
338.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
336.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
333.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
328.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
327.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
325.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
321.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
319.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
319.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
319.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
318.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
316.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
314.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
306.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
303.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
301.6
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
301.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
296.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
292.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
290.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
288.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
286.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
286.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
284.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
282.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
273.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
264.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
262.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
260.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
252.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
248.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
247.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
242.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
228.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
226.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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