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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 254.6
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 112.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 137.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1403.9
Min RPKM: 19.1
Std RPKM: 207.2
Median RPKM: 168.9
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1403.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1362.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
886.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
824.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
778.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
756.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
718.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
717.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
693.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
682.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
638.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
617.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
605.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
581.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
518.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
514.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
509.2
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
509.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
506.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
469.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
466.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
460.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
455.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
451.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
450.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
447.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
445.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
444.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
440.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
437.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
435.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
429.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
426.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
418.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
407.4
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
404.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
403.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
402.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
398.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
398.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
393.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
386.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
385.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
384.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
379.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
375.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
371.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
369.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
360.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
344.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
340.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
336.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
331.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
325.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
318.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
316.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
314.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
314.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
311.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
307.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
300.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
289.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
289.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
278.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
270.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
269.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
268.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
266.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
257.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
257.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
255.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
254.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
254.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
253.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
253.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
253.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
252.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
252.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
250.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
249.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
248.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
245.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
239.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
238.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
236.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
235.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
228.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
227.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
226.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
220.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
219.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
211.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
209.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
208.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
203.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
200.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
199.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
195.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
188.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
186.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
182.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
182.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
181.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
179.3
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
172.5
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
171.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
170.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
167.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
164.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
164.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
163.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
159.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
158.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
158.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
155.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
154.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
152.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
152.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
151.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
147.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
145.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
143.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
142.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
140.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
140.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
139.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
137.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
136.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
136.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
133.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
131.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
129.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
129.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
125.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
125.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
124.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
122.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
122.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
121.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
121.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
119.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
117.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
115.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
114.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
114.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
112.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
111.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
109.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
105.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
103.1
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
101.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
101.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
99.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
98.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
98.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
97.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
97.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
95.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
93.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
93.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
93.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
92.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
91.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
88.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
87.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
85.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
84.9
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
83.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
81.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
79.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
79.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
78.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
78.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
77.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
77.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
76.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
75.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
74.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
74.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
73.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
73.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
73.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
72.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
70.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
70.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
70.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
69.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
68.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
68.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
66.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
66.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
65.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
57.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
56.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
56.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
54.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
54.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
51.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
51.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
51.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
48.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
48.1
GTEX-1122O-1226-SM-5H113
60-69 years, female
47.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
45.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
45.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
45.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
44.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
43.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
36.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
35.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
33.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
31.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
23.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
19.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.