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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 3425.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2871.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4706.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1280.1
Min RPKM: 234.6
Std RPKM: 131.3
Median RPKM: 430.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1280.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
948.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
941.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
917.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
784.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
778.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
717.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
681.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
678.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
677.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
676.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
674.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
673.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
646.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
640.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
638.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
631.0
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
630.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
629.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
622.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
609.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
606.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
606.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
594.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
585.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
585.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
575.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
573.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
569.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
564.1
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
561.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
560.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
558.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
554.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
553.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
553.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
552.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
547.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
536.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
531.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
526.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
523.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
518.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
518.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
518.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
515.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
512.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
512.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
512.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
509.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
509.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
507.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
506.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
505.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
504.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
504.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
503.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
502.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
501.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
500.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
499.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
499.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
498.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
497.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
494.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
494.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
491.8
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
488.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
486.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
486.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
485.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
478.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
478.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
476.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
475.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
474.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
473.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
473.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
467.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
463.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
461.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
460.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
459.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
458.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
457.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
455.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
455.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
455.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
454.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
452.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
451.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
451.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
451.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
451.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
451.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
448.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
448.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
447.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
444.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
443.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
441.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
439.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
439.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
439.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
435.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
434.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
431.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
430.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
429.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
429.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
428.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
428.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
426.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
425.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
425.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
422.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
421.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
421.2
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
420.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
420.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
415.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
415.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
415.1
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
415.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
414.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
413.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
410.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
410.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
410.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
409.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
408.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
408.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
407.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
407.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
406.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
405.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
405.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
405.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
404.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
404.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
402.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
402.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
401.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
398.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
398.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
394.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
393.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
392.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
392.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
392.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
389.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
389.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
386.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
385.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
384.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
383.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
381.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
378.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
377.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
376.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
376.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
374.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
372.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
371.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
371.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
362.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
359.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
358.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
358.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
357.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
357.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
355.8
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
355.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
351.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
349.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
346.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
345.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
343.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
341.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
340.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
340.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
336.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
335.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
335.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
334.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
334.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
333.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
326.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
325.6
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
324.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
324.1
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
320.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
319.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
315.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
313.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
309.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
306.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
306.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
303.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
299.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
297.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
292.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
292.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
292.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
287.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
287.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
279.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
278.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
272.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
258.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
249.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
246.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
240.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
234.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.