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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 219.9
Min RPKM: 67.6
Std RPKM: 32.6
Median RPKM: 125.6
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
219.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
217.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
209.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
205.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
199.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
199.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
192.9
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
192.4
GTEX-QLQW-0126-SM-447BK
30-39 years, male
185.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
184.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
182.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
179.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
177.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
175.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
173.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
168.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
163.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
162.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
161.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
159.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
152.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
148.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
148.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
147.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
146.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
145.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
144.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
144.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
143.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
142.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
142.0
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
141.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
140.8
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
140.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
139.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
138.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
137.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
136.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
133.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
133.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
133.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
133.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
132.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
132.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
130.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
130.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
129.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
129.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
129.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
128.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
126.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
126.1
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
125.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
124.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
123.8
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
122.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
122.4
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
121.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
121.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
120.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
120.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
118.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
117.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
117.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
116.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
116.7
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
116.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
116.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
115.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
115.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
115.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
115.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
114.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
113.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
112.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
112.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
111.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
109.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
109.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
108.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
107.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
107.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
106.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
105.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
104.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
104.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
104.2
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
99.6
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
99.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
98.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
98.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
97.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
96.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
95.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
93.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
91.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
91.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
87.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
86.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
85.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
78.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
76.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
71.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
67.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.