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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 595.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 698.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1383
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 597.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 557.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 724
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 184.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 389.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 299.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 467.4
Min RPKM: 108.8
Std RPKM: 58.2
Median RPKM: 197.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
467.4
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
412.7
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
405.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
366.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
360.2
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
350.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
334.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
311.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
300.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
300.0
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
297.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
289.8
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
289.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
288.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
287.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
285.5
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
278.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
277.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
275.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
273.7
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
273.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
272.6
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
269.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
269.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
267.1
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
265.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
265.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
264.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
263.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
263.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
262.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
262.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
259.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
258.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
256.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
254.2
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
254.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
253.0
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
249.9
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
249.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
246.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
245.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
244.8
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
243.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
240.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
237.7
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
237.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
235.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
234.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
233.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
233.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
230.9
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
229.4
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
225.9
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
222.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
219.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
219.4
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
219.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
218.4
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
218.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
217.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
217.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
216.5
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
215.7
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
215.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
213.5
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
212.9
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
211.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
211.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
211.1
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
210.0
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
208.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
207.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
207.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
207.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
204.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
204.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
203.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
202.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
201.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
201.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
200.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
200.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
199.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
199.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
197.2
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
196.9
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
195.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
195.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
193.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
193.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
192.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
192.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
191.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
190.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
190.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
188.3
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
187.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
187.2
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
186.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
186.5
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
186.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
185.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
182.9
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
182.9
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
182.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
181.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
179.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
176.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
176.4
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
176.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
174.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
174.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
174.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
174.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
173.7
GTEX-REY6-0126-SM-48FDT
60-69 years, male
173.7
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
172.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
172.6
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
172.5
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
172.5
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
172.0
GTEX-12696-0226-SM-5EGL3
60-69 years, male
171.7
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
171.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
169.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
169.6
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
169.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
168.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
168.1
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
167.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
167.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
166.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
165.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
164.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
164.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
164.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
163.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
162.6
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
162.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
161.4
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
160.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
158.4
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
158.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
158.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
157.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
157.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
157.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
156.9
GTEX-13112-0226-SM-5P9IV
50-59 years, male
154.3
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
153.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
153.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
153.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
148.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
147.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
145.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
143.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
143.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
143.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
142.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
140.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
139.0
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
138.9
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
138.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
137.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
136.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
135.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
135.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
130.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
128.5
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
126.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
124.9
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
108.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.