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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2964.2
Min RPKM: 1149.4
Std RPKM: 410.6
Median RPKM: 1711.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
2964.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2814.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
2813.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
2779.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
2729.3
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
2591.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2584.7
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2554.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
2553.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
2540.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
2481.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
2296.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
2294.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
2246.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
2223.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
2166.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
2150.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
2099.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
2092.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
2075.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
2061.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
2045.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
2035.4
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1984.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1967.2
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1959.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1955.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1935.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1908.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1861.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1857.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1850.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1841.6
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1829.9
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1822.9
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1820.7
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
1804.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1795.4
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1784.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1761.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1755.9
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1753.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1748.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
1743.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1735.4
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1733.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
1724.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1719.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1711.2
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1704.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1701.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1696.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
1695.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
1693.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1689.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1685.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
1675.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1659.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1650.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1645.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1642.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1610.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1598.2
GTEX-11I78-1926-SM-59878
50-59 years, female
1587.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1583.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1579.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1564.5
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
1558.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1552.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
1532.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
1520.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1493.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
1473.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1472.7
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1472.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
1465.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1461.6
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1453.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1441.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1429.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
1418.8
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1408.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1406.5
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1405.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1401.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1354.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1343.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1325.5
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1285.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1279.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1273.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1266.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1266.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1266.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1210.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1174.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1149.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.