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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 431.7
Min RPKM: 102.8
Std RPKM: 58.6
Median RPKM: 217.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
431.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
398.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
355.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
354.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
339.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
336.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
325.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
323.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
322.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
319.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
316.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
316.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
316.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
301.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
292.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
292.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
289.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
288.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
288.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
279.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
277.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
276.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
266.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
264.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
264.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
264.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
260.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
260.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
258.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
254.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
252.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
250.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
249.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
246.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
245.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
245.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
243.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
243.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
243.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
241.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
241.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
239.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
238.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
237.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
236.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
231.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
229.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
227.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
225.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
225.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
224.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
223.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
222.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
222.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
221.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
220.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
219.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
217.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
217.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
215.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
213.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
213.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
212.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
212.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
212.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
211.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
211.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
209.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
208.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
206.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
205.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
203.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
202.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
200.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
198.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
198.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
197.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
195.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
195.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
194.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
194.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
192.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
190.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
189.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
189.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
188.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
188.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
187.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
187.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
187.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
186.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
185.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
182.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
182.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
181.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
179.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
176.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
175.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
173.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
169.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
165.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
164.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
162.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
162.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
154.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
154.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
152.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
149.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
148.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
147.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
146.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
144.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
140.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
138.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
133.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
108.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
102.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.