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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2147
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1886.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2184.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3301.8
Min RPKM: 437.1
Std RPKM: 359.7
Median RPKM: 888.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
3301.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
2343.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
2300.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
2256.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
2117.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1736.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1636.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1574.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1562.1
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1558.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1550.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1534.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1530.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1513.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1513.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1496.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1465.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1462.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1421.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1415.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1411.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1385.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1384.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1347.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1329.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1267.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1266.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1243.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1242.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1236.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1228.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
1214.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1208.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1198.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1198.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1184.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1178.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1167.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1161.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1159.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1153.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1151.9
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1137.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1134.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1134.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1123.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1121.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1116.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1116.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1111.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1110.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1105.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
1088.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
1084.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1082.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1081.7
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1080.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1078.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
1077.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1077.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1076.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
1076.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1075.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1069.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1058.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
1053.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1047.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1041.5
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1034.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1028.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1016.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1007.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1003.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1000.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
998.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
998.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
996.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
991.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
991.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
989.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
988.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
986.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
982.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
979.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
979.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
979.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
979.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
978.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
976.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
975.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
963.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
957.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
956.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
955.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
954.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
940.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
933.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
932.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
929.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
925.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
917.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
912.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
905.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
894.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
891.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
889.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
889.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
888.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
887.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
882.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
881.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
877.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
876.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
876.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
874.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
870.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
869.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
864.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
861.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
855.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
853.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
848.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
845.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
839.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
837.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
835.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
833.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
828.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
822.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
819.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
813.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
809.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
808.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
800.6
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
794.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
792.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
792.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
791.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
789.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
787.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
787.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
785.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
784.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
763.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
762.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
756.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
752.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
751.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
741.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
739.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
739.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
735.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
735.7
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
730.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
726.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
721.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
717.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
713.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
713.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
712.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
709.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
709.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
706.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
704.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
702.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
700.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
691.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
691.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
687.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
687.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
675.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
671.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
670.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
670.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
666.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
661.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
658.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
656.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
655.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
647.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
645.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
645.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
642.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
641.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
637.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
634.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
626.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
622.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
617.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
615.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
612.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
608.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
606.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
593.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
591.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
590.6
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
588.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
587.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
584.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
579.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
578.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
571.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
567.7
GTEX-117XS-1926-SM-5GICO
60-69 years, male
566.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
561.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
555.0
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
549.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
541.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
539.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
492.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
478.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
474.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
464.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
437.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.