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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 972.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 1079.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1713.7
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 915.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 1000.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 1081.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1159.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 1430.6
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1373.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 712.0
Min RPKM: 286.0
Std RPKM: 63.6
Median RPKM: 400.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
712.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
626.7
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
611.9
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
573.5
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
557.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
546.4
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
529.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
526.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
514.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
509.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
509.4
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
508.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
508.0
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
504.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
500.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
497.4
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
496.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
487.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
486.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
485.8
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
484.7
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
478.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
478.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
474.4
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
473.0
GTEX-XPT6-1626-SM-4B655
20-29 years, male
469.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
468.0
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
467.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
466.2
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
466.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
461.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
458.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
457.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
455.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
454.6
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
454.1
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
453.0
GTEX-QLQW-1026-SM-447A9
30-39 years, male
452.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
452.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
452.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
449.3
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
449.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
448.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
447.2
GTEX-RN64-2326-SM-48FDW
50-59 years, male
444.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
441.9
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
441.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
440.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
440.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
439.4
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
437.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
435.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
434.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
432.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
428.2
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
427.4
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
427.2
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
427.0
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
426.1
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
424.8
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
424.7
GTEX-13112-0226-SM-5P9IV
50-59 years, male
423.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
422.7
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
422.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
421.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
421.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
420.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
415.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
415.8
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
415.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
413.8
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
412.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
411.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
411.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
410.4
GTEX-R55D-0126-SM-48FEL
50-59 years, male
409.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
408.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
408.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
407.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
406.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
404.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
404.2
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
403.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
403.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
402.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
401.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
400.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
400.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
399.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
397.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
396.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
394.7
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
394.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
393.7
GTEX-117XS-2026-SM-5GID1
60-69 years, male
393.6
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
392.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
391.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
391.7
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
390.8
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
389.7
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
389.4
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
388.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
388.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
387.3
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
387.2
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
386.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
386.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
386.6
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
386.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
385.6
GTEX-REY6-0126-SM-48FDT
60-69 years, male
385.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
385.0
GTEX-11OF3-1826-SM-5987N
60-69 years, male
384.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
384.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
383.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
382.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
382.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
382.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
381.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
381.8
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
379.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
379.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
378.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
377.7
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
376.5
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
376.3
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
374.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
370.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
369.8
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
369.2
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
369.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
366.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
364.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
364.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
363.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
363.7
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
362.9
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
361.4
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
361.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
357.9
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
357.0
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
356.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
356.5
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
356.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
355.6
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
355.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
355.1
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
354.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
352.3
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
350.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
350.6
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
350.4
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
349.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
345.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
344.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
343.9
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
336.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
335.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
334.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
334.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
330.5
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
328.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
319.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
312.6
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
311.7
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
310.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
310.0
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
308.2
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
305.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
303.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
300.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
286.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.