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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1809.8
Min RPKM: 796.2
Std RPKM: 223.1
Median RPKM: 1226.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
1809.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1789.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1727.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1684.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
1669.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
1632.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1590.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1582.9
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
1579.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
1573.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1570.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1569.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
1560.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
1530.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
1509.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
1503.5
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
1502.7
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
1485.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
1477.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
1477.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1470.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
1468.7
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
1466.5
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
1466.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
1465.8
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
1446.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
1430.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1425.9
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
1417.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
1405.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
1403.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
1390.8
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
1388.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
1386.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
1382.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
1381.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
1380.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
1367.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1354.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
1330.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
1322.9
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
1315.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
1295.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
1287.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1281.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
1273.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
1265.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
1257.4
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
1247.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
1234.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
1230.9
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
1227.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
1225.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
1225.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
1223.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
1214.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
1212.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
1198.2
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
1195.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
1194.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
1182.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
1178.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
1176.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
1171.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
1171.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
1168.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1160.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
1156.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
1155.8
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1151.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1145.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
1144.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
1143.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
1142.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1142.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1141.1
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
1140.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1133.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
1125.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
1125.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
1124.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
1074.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
1074.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
1062.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
1055.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
1048.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
1048.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
1037.4
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
1023.5
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
1020.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
1019.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
1012.9
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
1011.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
1001.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
971.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
966.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
956.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
938.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
906.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
893.9
GTEX-Q734-0226-SM-48U1A
40-49 years, female
856.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
846.5
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
815.2
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
796.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.