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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4197.2
Min RPKM: 1427.0
Std RPKM: 574.6
Median RPKM: 2209.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
4197.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
3729.8
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
3717.5
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
3680.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
3436.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
3372.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
3338.6
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
3300.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
3200.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
3187.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
3124.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
3029.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
2988.3
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
2986.6
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
2986.3
GTEX-RU72-2226-SM-46MUE
50-59 years, female
2919.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
2862.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
2815.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
2744.4
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
2720.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
2702.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
2658.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
2612.2
GTEX-P78B-1926-SM-3P616
40-49 years, female
2577.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
2570.2
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
2527.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
2476.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
2446.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
2434.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
2419.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
2401.3
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
2387.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
2360.5
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
2353.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
2347.3
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
2340.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
2301.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
2294.0
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
2293.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
2291.9
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
2289.8
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
2285.1
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
2261.4
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
2246.9
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
2242.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
2228.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
2224.4
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
2212.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
2209.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
2189.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
2180.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
2143.6
GTEX-11I78-1926-SM-59878
50-59 years, female
2134.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
2118.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
2109.0
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
2087.6
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
2072.9
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
2049.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
2041.1
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
2028.9
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
2024.3
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
2008.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
2007.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
2001.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
1973.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
1959.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
1957.0
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
1912.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1904.4
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
1902.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1898.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1882.6
GTEX-QCQG-1426-SM-48U22
50-59 years, female
1867.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
1852.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1846.6
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
1836.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
1830.1
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1826.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
1813.9
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
1801.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
1796.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
1795.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
1784.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
1740.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
1721.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1701.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
1669.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
1645.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
1628.3
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
1616.2
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
1566.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
1565.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
1514.0
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1505.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
1499.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1441.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1427.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.