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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 834.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 593.2
Min RPKM: 183.3
Std RPKM: 75.8
Median RPKM: 317.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
593.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
518.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
514.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
512.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
506.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
500.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
499.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
472.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
464.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
455.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
453.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
442.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
441.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
438.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
435.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
422.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
403.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
403.1
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
397.4
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
395.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
391.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
390.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
388.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
387.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
386.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
376.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
370.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
365.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
362.3
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
361.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
359.5
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
358.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
357.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
355.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
353.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
351.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
349.4
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
349.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
348.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
344.5
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
340.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
339.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
339.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
332.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
329.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
328.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
327.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
323.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
323.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
322.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
322.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
321.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
321.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
321.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
319.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
318.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
318.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
316.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
315.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
312.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
311.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
311.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
309.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
308.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
306.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
305.0
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
304.8
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
304.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
303.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
301.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
301.3
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
300.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
299.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
299.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
297.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
297.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
295.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
294.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
291.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
288.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
287.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
286.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
285.2
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
283.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
283.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
282.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
282.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
280.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
280.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
277.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
277.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
276.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
270.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
270.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
269.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
267.0
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
266.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
266.6
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
263.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
263.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
260.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
256.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
255.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
249.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
244.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
242.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
235.6
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
230.9
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
230.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
228.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
225.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
209.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
190.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
183.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 343.7
Samples: 108
Max RPKM: 793.2
Min RPKM: 166.4
Std RPKM: 104.0
Median RPKM: 315.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
793.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
723.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
691.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
590.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
553.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
495.6
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
490.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
487.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
486.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
485.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
480.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
473.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
459.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
447.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
438.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
437.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
426.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
424.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
419.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
416.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
416.3
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
408.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
404.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
403.6
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
400.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
398.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
390.9
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
388.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
388.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
386.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
382.8
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
379.5
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
379.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
377.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
372.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
371.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
369.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
366.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
363.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
352.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
346.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
341.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
333.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
333.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
327.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
324.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
323.4
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
323.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
322.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
319.6
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
319.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
319.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
317.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
316.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
314.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
313.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
312.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
310.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
309.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
308.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
308.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
306.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
304.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
304.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
303.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
301.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
297.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
297.1
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
291.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
290.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
289.1
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
288.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
283.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
283.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
282.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
282.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
280.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
278.8
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
278.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
275.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
275.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
274.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
273.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
273.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
272.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
272.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
269.3
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
269.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
266.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
265.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
261.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
261.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
261.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
260.9
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
260.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
255.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
255.0
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
249.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
239.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
238.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
235.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
230.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
226.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
214.7
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
209.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
200.3
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
194.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
166.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.