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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 784.9
Min RPKM: 180.3
Std RPKM: 104.7
Median RPKM: 383.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
784.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
692.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
684.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
631.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
627.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
581.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
562.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
559.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
558.7
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
535.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
531.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
523.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
520.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
520.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
517.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
506.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
493.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
488.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
487.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
485.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
478.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
472.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
470.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
464.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
463.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
458.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
457.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
453.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
450.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
450.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
450.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
442.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
440.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
440.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
440.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
429.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
427.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
425.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
418.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
417.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
416.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
416.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
416.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
414.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
412.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
411.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
409.1
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
408.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
406.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
397.4
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
396.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
395.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
394.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
393.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
393.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
389.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
385.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
384.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
383.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
380.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
380.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
379.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
375.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
372.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
370.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
366.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
364.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
364.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
363.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
360.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
356.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
354.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
353.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
352.0
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
351.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
350.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
350.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
347.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
347.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
347.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
344.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
342.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
339.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
336.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
336.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
335.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
335.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
334.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
333.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
325.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
321.3
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
319.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
313.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
312.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
307.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
305.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
305.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
295.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
293.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
293.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
292.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
287.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
278.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
278.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
276.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
276.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
270.4
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
253.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
249.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
245.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
239.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
237.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
231.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
228.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
222.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
188.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
180.3
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.