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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 4369.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 3400.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4910.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4360.0
Min RPKM: 597.6
Std RPKM: 426.8
Median RPKM: 1129.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
4360.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
2858.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
2809.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
2547.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
2533.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
2412.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1975.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1973.2
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1958.4
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1942.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1942.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
1941.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1880.9
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
1868.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1843.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1833.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1824.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
1820.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1744.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1715.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
1679.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
1676.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1669.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
1638.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1615.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1595.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1582.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1558.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1557.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1548.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1547.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1546.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1541.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1530.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
1501.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1493.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1486.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1483.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
1466.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1454.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1430.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1430.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1418.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1418.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
1411.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1407.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1405.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1403.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1403.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1403.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1400.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1399.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
1386.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1384.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1377.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
1360.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
1359.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
1353.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1340.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1331.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
1331.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1331.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
1330.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1330.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
1312.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
1310.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1305.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
1296.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
1296.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
1278.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1278.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1276.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1276.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
1275.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
1274.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1271.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1271.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1257.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1245.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
1237.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1237.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
1233.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1226.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
1224.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1220.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1213.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1209.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
1206.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1199.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
1188.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
1181.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1178.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
1171.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1169.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
1169.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1165.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
1165.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1162.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
1157.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1156.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
1153.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
1152.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
1144.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
1137.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
1135.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1134.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
1133.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1125.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
1123.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
1122.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1120.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
1115.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
1115.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
1113.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
1112.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
1104.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
1103.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1098.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
1095.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
1092.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
1092.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1083.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
1078.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
1078.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
1077.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
1076.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1073.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
1069.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
1062.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
1061.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
1054.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1053.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
1052.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
1052.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1051.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
1045.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
1045.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
1041.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
1040.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
1037.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
1030.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1028.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1028.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
1027.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
1025.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
1023.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1017.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
1009.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1008.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
1008.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
1003.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
999.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
997.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
995.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
994.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
988.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
987.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
980.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
980.0
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
978.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
971.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
967.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
963.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
954.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
952.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
951.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
943.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
943.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
942.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
939.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
930.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
923.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
923.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
920.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
913.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
907.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
902.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
899.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
898.4
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
895.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
889.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
883.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
881.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
879.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
878.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
878.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
874.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
862.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
843.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
837.9
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
837.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
836.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
832.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
831.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
823.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
815.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
800.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
794.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
790.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
785.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
785.1
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
783.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
759.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
755.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
754.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
729.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
721.0
GTEX-R53T-1526-SM-48FEK
50-59 years, female
718.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
716.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
711.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
686.5
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
676.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
624.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
597.6
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.