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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 63.3
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 14.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 12.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 26.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 27.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 31.1
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 16.4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 24.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 279.2
Min RPKM: 3.1
Std RPKM: 54.6
Median RPKM: 60.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
279.2
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
276.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
228.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
218.3
GTEX-REY6-1226-SM-48FDR
60-69 years, male
213.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
210.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
190.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
180.4
GTEX-S33H-1626-SM-4AD68
30-39 years, male
175.4
GTEX-S32W-1926-SM-4AD63
50-59 years, female
169.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
164.6
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
163.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
160.1
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
151.0
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
144.3
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
138.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
131.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
130.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
130.0
GTEX-13113-1326-SM-5GCOI
60-69 years, female
121.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
119.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
118.0
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
116.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
116.1
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
114.3
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
111.6
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
109.1
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
105.4
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
104.9
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
100.3
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
97.6
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
96.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
94.4
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
94.1
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
93.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
92.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
92.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
87.2
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
86.1
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
85.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
82.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
82.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
80.5
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
79.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
78.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
75.2
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
72.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
69.3
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
68.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
68.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
67.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
67.3
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
66.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
66.5
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
66.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
64.3
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
63.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
61.8
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
60.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
60.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
59.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
59.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
58.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
56.5
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
55.8
GTEX-1399T-0826-SM-5IFES
60-69 years, male
54.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
53.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
53.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
53.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
53.2
GTEX-QESD-2026-SM-447BI
20-29 years, male
53.1
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
52.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
51.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
51.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
51.1
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
50.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
49.4
GTEX-X261-1726-SM-4PQYT
50-59 years, male
48.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
48.6
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
48.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
48.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
46.0
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
45.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
45.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
44.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
43.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
43.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
42.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
42.2
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
42.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
41.5
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
40.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
39.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
39.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
39.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
38.5
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
37.3
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
35.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
35.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
34.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
33.7
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
32.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
30.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
28.0
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
27.9
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
27.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
27.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
27.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
26.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
26.4
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
25.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
24.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
24.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
22.9
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
20.4
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
19.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
19.7
GTEX-13112-1426-SM-5EGH8
50-59 years, male
19.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
3.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
