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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 325.0
Min RPKM: 38.5
Std RPKM: 71.3
Median RPKM: 174.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
325.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
312.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
305.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
300.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
297.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
293.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
289.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
283.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
283.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
283.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
275.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
268.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
262.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
261.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
258.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
255.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
251.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
244.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
243.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
236.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
232.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
230.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
230.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
229.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
229.0
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
225.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
223.0
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
222.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
220.4
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
219.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
213.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
212.5
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
209.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
200.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
199.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
193.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
189.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
187.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
187.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
187.2
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
185.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
183.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
182.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
180.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
178.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
176.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
175.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
173.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
172.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
165.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
164.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
164.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
164.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
162.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
162.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
156.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
155.2
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
144.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
144.5
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
141.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
140.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
139.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
139.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
137.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
133.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
132.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
132.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
129.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
125.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
123.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
120.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
119.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
119.5
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
117.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
117.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
111.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
105.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
101.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
99.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
96.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
96.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
90.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
87.0
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
84.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
76.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
72.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
68.7
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
63.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
63.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
61.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
55.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
55.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
42.1
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
38.5
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.