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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1247.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 234.3
Min RPKM: 54.4
Std RPKM: 40.0
Median RPKM: 127.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
234.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
233.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
208.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
201.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
200.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
195.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
188.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
185.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
183.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
180.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
176.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
176.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
175.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
174.6
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
173.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
172.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
171.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
170.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
170.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
169.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
165.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
162.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
162.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
162.2
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
161.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
161.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
157.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
154.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
153.7
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
153.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
151.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
151.4
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
150.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
149.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
149.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
146.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
145.7
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
145.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
145.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
144.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
143.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
142.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
140.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
140.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
140.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
139.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
138.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
137.4
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
136.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
135.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
133.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
132.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
131.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
129.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
129.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
128.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
128.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
127.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
126.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
124.5
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
121.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
120.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
120.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
118.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
118.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
118.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
117.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
116.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
115.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
115.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
114.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
114.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
113.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
112.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
110.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
110.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
109.8
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
108.7
GTEX-1128S-2726-SM-5H12C
60-69 years, female
106.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
106.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
105.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
104.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
102.6
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
100.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
98.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
97.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
95.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
94.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
94.3
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
88.8
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
87.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
84.9
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
82.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
81.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
80.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
79.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
77.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
77.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
76.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
76.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
75.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
74.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
72.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
70.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
69.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
68.6
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
68.2
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
66.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
64.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
62.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
61.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
60.6
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
55.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
54.4
Show all
Brain - Frontal Cortex (BA9) RPKM: 249.7
Samples: 108
Max RPKM: 444.5
Min RPKM: 38.0
Std RPKM: 99.6
Median RPKM: 257.4
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
444.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
435.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
431.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
417.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
400.7
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
394.1
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
390.1
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
383.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
383.1
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
381.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
379.3
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
377.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
376.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
373.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
365.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
364.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
364.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
360.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
355.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
352.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
352.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
351.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
349.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
346.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
344.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
327.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
325.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
322.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
315.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
312.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
306.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
305.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
305.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
304.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
304.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
297.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
295.0
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
292.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
292.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
292.1
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
290.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
288.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
284.0
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
281.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
281.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
281.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
274.8
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
271.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
271.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
271.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
270.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
266.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
260.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
257.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
257.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
255.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
248.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
242.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
240.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
239.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
239.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
237.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
234.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
232.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
231.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
231.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
229.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
228.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
226.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
219.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
218.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
211.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
206.0
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
205.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
202.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
201.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
197.4
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
186.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
182.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
180.3
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
179.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
173.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
173.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
163.3
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
160.5
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
159.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
156.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
145.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
145.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
140.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
139.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
130.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
120.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
118.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
108.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
106.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
105.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
100.6
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
97.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
96.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
96.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
91.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
78.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
64.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
62.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
53.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
48.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
38.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.