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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 311.5
Min RPKM: 34.5
Std RPKM: 65.1
Median RPKM: 165.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
311.5
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
300.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
292.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
283.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
278.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
271.0
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
265.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
264.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
261.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
255.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
255.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
255.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
250.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
247.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
244.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
244.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
238.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
233.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
232.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
228.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
226.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
225.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
224.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
219.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
218.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
218.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
217.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
216.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
214.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
208.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
207.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
207.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
206.1
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
206.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
205.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
204.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
202.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
202.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
202.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
201.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
200.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
200.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
198.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
192.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
190.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
190.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
185.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
180.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
178.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
178.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
177.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
177.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
176.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
173.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
172.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
170.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
169.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
166.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
165.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
162.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
160.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
158.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
157.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
156.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
152.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
151.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
149.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
146.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
146.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
143.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
141.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
140.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
140.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
140.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
139.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
139.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
135.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
135.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
134.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
134.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
127.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
127.1
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
125.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
123.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
121.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
121.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
121.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
119.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
112.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
107.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
101.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
98.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
92.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
91.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
91.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
90.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
88.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
86.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
85.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
84.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
83.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
82.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
81.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
81.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
79.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
77.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
77.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
74.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
72.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
63.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
62.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
61.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
58.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
54.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
51.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
43.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
34.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.