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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 324.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 538.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 805
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 353.4
Min RPKM: 41.8
Std RPKM: 48.2
Median RPKM: 131.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
353.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
330.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
269.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
235.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
230.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
226.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
223.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
221.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
219.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
218.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
217.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
208.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
207.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
207.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
204.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
204.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
200.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
200.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
197.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
195.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
195.5
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
195.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
191.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
191.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
189.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
189.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
187.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
185.5
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
184.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
183.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
181.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
181.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
180.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
179.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
179.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
178.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
177.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
177.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
176.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
175.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
172.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
171.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
171.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
171.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
170.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
168.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
168.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
167.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
167.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
166.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
166.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
166.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
165.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
165.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
165.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
165.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
163.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
163.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
161.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
161.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
160.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
159.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
159.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
159.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
158.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
158.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
156.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
156.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
155.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
154.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
153.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
153.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
152.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
152.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
152.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
151.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
149.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
146.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
146.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
146.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
145.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
145.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
145.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
144.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
144.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
144.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
144.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
142.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
142.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
142.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
141.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
141.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
140.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
140.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
139.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
139.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
139.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
138.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
138.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
133.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
133.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
132.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
132.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
132.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
131.7
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
131.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
131.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
131.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
130.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
130.3
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
129.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
129.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
128.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
127.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
126.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
124.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
124.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
123.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
123.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
121.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
120.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
120.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
120.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
120.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
119.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
118.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
117.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
117.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
116.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
115.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
115.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
115.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
114.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
114.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
113.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
113.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
113.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
110.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
110.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
107.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
107.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
107.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
106.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
106.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
103.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
102.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
102.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
101.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
101.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
100.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
99.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
99.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
98.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
98.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
98.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
98.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
96.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
96.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
96.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
95.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
94.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
94.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
93.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
93.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
93.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
93.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
90.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
89.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
87.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
87.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
87.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
87.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
86.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
86.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
86.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
85.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
85.2
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
84.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
84.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
84.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
84.0
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
83.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
83.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
83.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
83.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
82.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
82.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
81.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
81.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
81.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
80.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
80.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
79.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
79.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
77.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
76.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
76.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
75.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
72.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
72.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
71.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
70.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
70.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
70.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
70.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
68.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
67.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
62.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
61.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
60.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
57.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
52.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
51.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
41.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.