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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 236.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 16.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 15.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 772.7
Min RPKM: 58.9
Std RPKM: 110.9
Median RPKM: 254.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
772.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
663.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
611.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
559.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
550.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
487.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
465.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
464.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
455.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
445.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
445.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
443.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
431.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
429.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
429.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
421.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
421.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
421.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
417.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
416.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
412.9
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
410.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
406.0
GTEX-QVJO-1826-SM-447C9
60-69 years, female
405.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
402.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
399.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
394.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
392.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
391.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
390.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
386.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
386.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
385.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
378.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
368.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
366.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
352.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
351.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
345.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
341.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
335.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
335.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
331.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
328.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
328.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
325.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
325.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
323.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
322.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
320.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
319.0
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
316.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
315.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
314.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
313.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
311.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
308.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
306.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
304.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
302.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
300.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
299.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
298.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
296.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
295.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
295.4
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
293.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
292.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
291.5
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
291.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
289.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
287.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
287.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
287.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
285.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
284.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
280.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
278.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
278.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
278.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
277.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
277.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
277.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
276.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
276.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
276.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
275.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
273.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
272.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
271.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
270.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
270.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
268.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
267.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
267.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
266.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
266.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
265.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
263.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
262.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
260.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
259.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
259.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
259.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
257.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
255.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
255.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
254.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
253.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
253.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
253.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
253.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
252.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
251.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
247.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
245.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
242.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
242.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
242.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
238.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
237.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
236.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
233.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
232.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
231.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
231.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
225.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
221.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
220.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
219.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
216.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
215.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
213.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
209.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
209.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
209.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
208.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
208.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
207.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
206.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
205.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
204.5
GTEX-TML8-1226-SM-32QON
40-49 years, female
203.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
203.3
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
203.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
199.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
199.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
198.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
196.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
195.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
195.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
193.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
190.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
189.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
188.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
186.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
184.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
182.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
182.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
180.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
179.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
178.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
178.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
176.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
174.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
174.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
174.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
170.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
168.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
166.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
166.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
163.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
162.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
160.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
160.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
154.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
153.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
153.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
151.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
145.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
144.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
143.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
143.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
142.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
141.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
140.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
139.9
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
138.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
138.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
137.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
133.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
131.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
130.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
128.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
125.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
124.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
123.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
120.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
119.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
118.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
117.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
115.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
112.3
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
111.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
106.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
103.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
99.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
93.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
93.3
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
90.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
89.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
80.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
68.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
58.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.