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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1085.2
Min RPKM: 29.5
Std RPKM: 212.2
Median RPKM: 334.6
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1085.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
919.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
907.8
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
768.6
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
691.4
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
671.3
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
649.5
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
640.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
636.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
610.0
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
608.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
603.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
592.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
590.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
562.9
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
556.2
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
550.5
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
539.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
532.6
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
527.8
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
527.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
516.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
513.2
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
496.5
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
495.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
486.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
483.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
465.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
455.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
448.9
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
445.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
424.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
408.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
406.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
401.1
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
394.8
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
393.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
391.9
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
391.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
380.7
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
376.0
GTEX-QCQG-1226-SM-48U23
50-59 years, female
369.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
355.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
350.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
350.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
347.6
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
338.3
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
334.9
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
334.2
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
333.1
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
326.9
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
322.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
284.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
280.8
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
276.6
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
270.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
265.0
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
254.8
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
248.7
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
248.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
240.9
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
232.1
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
227.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
227.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
227.0
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
220.3
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
218.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
216.5
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
214.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
210.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
203.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
178.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
177.0
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
176.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
174.4
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
165.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
148.8
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
144.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
136.1
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
135.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
131.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
124.4
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
121.4
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
116.0
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
113.9
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
110.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
97.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
95.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
81.5
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
78.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
78.9
GTEX-S341-1226-SM-4AD5S
40-49 years, female
44.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
42.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
39.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
37.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
29.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.