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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1043.4
Min RPKM: 210.6
Std RPKM: 166.2
Median RPKM: 521.7
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1043.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
1015.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
990.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
965.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
944.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
832.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
825.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
821.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
789.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
780.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
772.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
756.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
715.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
697.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
696.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
691.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
687.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
684.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
674.2
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
661.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
659.6
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
649.1
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
643.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
641.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
628.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
628.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
626.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
623.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
610.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
606.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
597.2
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
595.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
593.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
582.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
579.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
578.1
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
576.3
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
576.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
568.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
566.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
559.2
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
550.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
546.3
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
544.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
540.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
540.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
538.8
GTEX-11I78-1926-SM-59878
50-59 years, female
534.4
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
521.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
519.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
518.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
515.8
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
511.7
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
509.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
506.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
504.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
503.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
503.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
497.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
480.8
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
477.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
473.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
472.9
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
469.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
468.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
465.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
457.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
455.7
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
454.7
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
452.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
446.5
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
441.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
439.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
428.4
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
426.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
426.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
424.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
421.9
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
420.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
417.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
405.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
402.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
398.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
392.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
376.2
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
374.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
372.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
357.8
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
350.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
329.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
327.2
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
321.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
314.7
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
306.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
280.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
276.9
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
210.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.