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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 96.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 12.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 10.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 695.0
Min RPKM: 54.0
Std RPKM: 91.7
Median RPKM: 219.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
695.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
510.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
481.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
478.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
470.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
453.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
440.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
408.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
391.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
385.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
375.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
369.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
368.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
366.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
362.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
362.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
358.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
351.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
346.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
340.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
339.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
334.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
332.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
331.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
321.5
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
319.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
316.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
315.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
313.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
310.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
310.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
309.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
306.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
301.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
299.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
298.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
298.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
296.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
296.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
291.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
290.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
285.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
282.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
282.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
279.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
279.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
278.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
277.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
276.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
276.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
274.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
273.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
273.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
273.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
272.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
270.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
268.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
267.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
263.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
263.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
262.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
257.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
255.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
254.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
254.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
253.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
253.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
252.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
251.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
250.6
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
249.8
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
249.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
248.6
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
247.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
246.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
245.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
244.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
244.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
242.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
237.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
236.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
236.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
236.2
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
234.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
233.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
233.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
233.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
232.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
231.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
231.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
230.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
227.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
227.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
227.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
226.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
226.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
224.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
223.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
221.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
221.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
221.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
220.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
220.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
220.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
220.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
220.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
219.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
219.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
218.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
217.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
216.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
213.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
211.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
209.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
209.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
208.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
206.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
205.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
204.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
203.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
202.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
201.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
193.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
191.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
190.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
189.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
187.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
186.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
185.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
182.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
181.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
180.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
180.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
179.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
178.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
178.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
177.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
173.8
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
173.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
173.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
172.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
172.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
170.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
169.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
167.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
166.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
166.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
165.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
165.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
165.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
165.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
165.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
164.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
163.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
160.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
159.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
159.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
159.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
158.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
158.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
157.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
155.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
155.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
154.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
153.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
151.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
151.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
151.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
151.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
151.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
146.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
145.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
143.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
142.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
138.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
136.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
135.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
133.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
133.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
133.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
132.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
131.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
131.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
129.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
129.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
128.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
126.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
125.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
124.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
124.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
121.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
121.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
119.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
117.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
115.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
114.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
114.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
111.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
110.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
109.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
106.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
103.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
97.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
96.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
95.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
94.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
94.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
92.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
79.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
79.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
78.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
68.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
67.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
54.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.