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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 160.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 205.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 977.6
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 109.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 146.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 477.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 41.6
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 150.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 58.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 565.8
Min RPKM: 46.4
Std RPKM: 90.5
Median RPKM: 155.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
565.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
562.7
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
467.7
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
459.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
436.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
400.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
384.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
384.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
345.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
342.1
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
340.1
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
310.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
308.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
305.9
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
296.6
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
294.8
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
292.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
288.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
281.4
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
270.3
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
268.3
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
267.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
266.9
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
261.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
252.1
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
244.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
243.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
243.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
240.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
232.1
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
231.0
GTEX-V955-1926-SM-4KL1L
60-69 years, male
228.1
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
227.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
226.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
221.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
221.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
219.3
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
219.1
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
216.2
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
212.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
212.3
GTEX-XPT6-1626-SM-4B655
20-29 years, male
211.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
211.7
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
208.1
GTEX-S33H-0126-SM-4AD62
30-39 years, male
205.9
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
205.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
204.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
203.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
200.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
200.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
199.6
GTEX-X261-2326-SM-4PQYU
50-59 years, male
196.7
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
195.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
194.5
GTEX-QLQW-1026-SM-447A9
30-39 years, male
192.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
191.9
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
189.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
184.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
183.5
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
183.4
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
180.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
178.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
178.4
GTEX-13111-1526-SM-5EGJX
50-59 years, male
178.3
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
177.7
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
177.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
176.8
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
175.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
173.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
173.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
172.7
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
172.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
171.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
169.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
169.5
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
167.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
166.6
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
166.5
GTEX-RN64-2326-SM-48FDW
50-59 years, male
164.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
164.1
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
163.8
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
159.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
157.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
157.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
156.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
156.1
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
154.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
154.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
153.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
152.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
150.6
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
149.6
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
148.6
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
147.8
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
146.5
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
146.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
145.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
144.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
144.2
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
142.7
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
139.9
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
139.8
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
138.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
138.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
137.6
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
136.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
136.6
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
133.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
133.6
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
131.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
131.0
GTEX-11OF3-1826-SM-5987N
60-69 years, male
129.5
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
127.1
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
126.8
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
126.6
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
126.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
125.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
125.0
GTEX-REY6-0126-SM-48FDT
60-69 years, male
124.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
123.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
123.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
122.3
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
118.9
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
118.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
116.5
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
115.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
115.3
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
113.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
113.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
110.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
109.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
109.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
109.3
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
108.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
108.4
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
108.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
106.7
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
106.4
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
103.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
102.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
101.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
100.5
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
99.5
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
98.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
98.2
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
97.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
95.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
94.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
93.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
93.1
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
93.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
92.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
92.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
91.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
88.7
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
88.1
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
87.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
76.7
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
75.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
74.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
74.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
74.1
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
70.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
69.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
67.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
67.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
63.8
GTEX-Y111-2426-SM-4TT23
50-59 years, male
58.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
58.8
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
51.8
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
50.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
46.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.