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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1490.4
Min RPKM: 235.9
Std RPKM: 280.1
Median RPKM: 578.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1490.4
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1451.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1328.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1210.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
1160.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1140.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1136.3
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
1125.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
1090.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
1017.8
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
994.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
956.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
953.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
939.4
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
918.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
908.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
892.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
877.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
865.3
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
849.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
841.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
835.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
833.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
823.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
819.0
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
810.5
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
782.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
777.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
772.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
771.2
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
755.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
730.5
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
727.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
717.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
717.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
679.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
673.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
670.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
656.5
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
654.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
635.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
635.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
630.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
625.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
623.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
606.1
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
601.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
583.3
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
578.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
575.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
572.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
571.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
554.4
GTEX-11I78-1926-SM-59878
50-59 years, female
550.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
541.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
532.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
523.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
505.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
503.4
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
495.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
494.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
468.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
461.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
459.8
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
459.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
455.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
443.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
442.6
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
442.5
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
437.2
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
423.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
421.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
408.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
402.2
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
401.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
400.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
383.3
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
381.3
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
373.4
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
373.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
366.5
GTEX-P78B-1926-SM-3P616
40-49 years, female
357.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
351.0
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
327.4
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
318.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
316.8
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
313.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
312.0
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
303.3
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
300.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
296.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
295.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
293.9
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
289.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
276.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
249.6
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
235.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.