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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 542
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 230.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 125.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2360.2
Min RPKM: 173.5
Std RPKM: 328.2
Median RPKM: 539.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
2360.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
1899.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1723.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
1650.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1547.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
1512.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
1511.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1489.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
1453.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
1396.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
1341.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
1279.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1226.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1143.4
GTEX-XBED-1626-SM-47JYN
60-69 years, male
1128.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
1075.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1036.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1032.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1024.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1008.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1002.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
985.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
959.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
930.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
912.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
909.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
909.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
885.0
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
863.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
861.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
860.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
854.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
847.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
846.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
843.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
827.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
826.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
810.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
808.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
805.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
796.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
795.5
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
785.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
782.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
782.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
777.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
767.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
766.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
752.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
749.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
746.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
745.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
739.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
736.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
732.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
731.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
727.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
724.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
715.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
710.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
701.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
700.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
700.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
698.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
693.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
686.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
683.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
679.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
673.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
672.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
671.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
660.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
657.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
656.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
653.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
652.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
652.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
652.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
648.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
644.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
635.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
627.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
626.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
622.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
622.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
613.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
605.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
603.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
601.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
600.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
593.8
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
591.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
591.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
590.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
590.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
587.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
580.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
570.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
567.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
560.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
554.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
551.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
549.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
546.5
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
544.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
541.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
540.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
538.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
535.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
533.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
530.5
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
528.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
525.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
524.7
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
522.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
521.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
516.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
511.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
509.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
509.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
503.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
501.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
499.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
499.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
498.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
497.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
493.7
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
485.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
483.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
478.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
469.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
462.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
455.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
454.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
453.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
452.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
450.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
449.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
448.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
444.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
442.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
439.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
434.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
427.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
427.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
424.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
424.0
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
419.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
415.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
414.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
410.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
409.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
408.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
399.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
397.7
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
396.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
396.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
395.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
392.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
392.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
385.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
384.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
376.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
368.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
366.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
366.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
365.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
364.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
364.1
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
362.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
361.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
360.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
355.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
354.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
354.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
354.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
353.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
352.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
346.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
340.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
332.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
324.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
323.8
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
315.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
313.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
312.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
312.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
311.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
296.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
292.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
290.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
287.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
286.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
286.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
285.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
284.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
282.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
282.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
276.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
266.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
258.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
254.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
254.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
246.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
244.5
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
240.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
233.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
229.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
220.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
214.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
196.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
188.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
183.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
173.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.