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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 74.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 44.1
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 20.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 269.3
Min RPKM: 52.9
Std RPKM: 36.9
Median RPKM: 134.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
269.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
263.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
258.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
253.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
239.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
237.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
228.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
227.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
224.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
219.7
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
219.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
217.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
213.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
206.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
198.4
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
193.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
188.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
187.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
183.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
183.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
182.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
181.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
179.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
178.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
178.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
177.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
177.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
176.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
175.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
174.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
174.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
173.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
173.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
172.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
172.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
171.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
171.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
170.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
170.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
170.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
168.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
168.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
166.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
166.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
165.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
165.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
164.4
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
163.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
162.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
162.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
162.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
160.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
158.9
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
158.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
158.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
158.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
157.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
157.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
156.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
156.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
155.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
155.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
154.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
154.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
152.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
152.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
152.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
151.9
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
151.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
151.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
150.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
149.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
149.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
149.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
147.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
147.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
147.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
147.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
146.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
146.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
145.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
145.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
145.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
145.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
144.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
143.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
142.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
141.7
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
141.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
141.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
140.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
140.8
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
140.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
140.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
139.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
139.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
138.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
138.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
138.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
138.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
138.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
137.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
137.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
137.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
136.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
134.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
134.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
134.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
134.2
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
133.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
133.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
132.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
132.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
132.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
131.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
131.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
131.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
131.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
131.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
131.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
130.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
130.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
130.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
129.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
128.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
128.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
128.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
127.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
127.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
127.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
127.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
126.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
125.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
125.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
125.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
124.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
124.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
123.7
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
123.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
123.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
122.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
122.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
122.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
122.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
122.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
121.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
121.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
120.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
120.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
120.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
120.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
120.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
120.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
118.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
118.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
118.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
117.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
117.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
116.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
116.7
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
116.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
116.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
116.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
114.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
114.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
114.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
114.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
113.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
112.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
111.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
111.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
111.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
110.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
110.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
110.0
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
109.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
108.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
107.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
106.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
105.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
105.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
105.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
104.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
104.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
104.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
103.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
102.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
102.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
101.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
100.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
99.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
98.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
98.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
97.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
96.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
96.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
93.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
93.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
92.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
91.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
91.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
90.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
89.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
88.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
84.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
83.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
83.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
82.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
81.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
80.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
79.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
75.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
74.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
52.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.