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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1052.8
Min RPKM: 402.5
Std RPKM: 161.7
Median RPKM: 691.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
1052.8
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1022.8
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
1021.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
1020.9
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
995.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
992.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
988.7
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
967.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
965.0
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
962.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
962.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
951.1
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
943.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
939.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
909.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
901.1
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
890.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
880.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
879.1
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
863.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
863.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
847.6
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
844.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
833.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
832.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
830.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
823.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
815.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
809.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
802.7
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
798.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
771.6
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
768.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
761.9
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
752.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
742.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
741.0
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
739.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
732.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
730.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
724.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
722.2
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
722.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
718.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
718.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
717.2
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
713.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
713.0
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
709.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
709.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
706.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
692.9
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
690.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
685.8
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
681.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
678.6
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
677.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
677.4
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
676.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
669.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
667.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
649.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
648.4
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
644.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
641.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
634.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
627.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
625.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
617.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
612.7
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
609.9
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
604.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
597.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
583.3
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
581.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
580.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
576.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
570.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
568.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
555.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
553.0
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
550.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
549.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
544.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
531.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
531.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
529.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
524.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
523.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
521.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
517.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
517.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
498.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
496.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
495.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
495.2
GTEX-X585-1826-SM-4QAS3
50-59 years, male
486.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
486.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
486.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
474.3
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
470.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
468.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
415.7
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
402.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.